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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXL2Lysyl oxidase like 2. (774 aa)    
Predicted Functional Partners:
LOXL4
Lysyl oxidase like 4.
  
 
 
0.720
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.681
LOXL3
Lysyl oxidase like 3.
  
 
 
0.661
WDR90
WD repeat domain 90.
    
 0.657
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.631
FBLN5
Fibulin 5.
     
 0.623
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.618
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.615
ARID4A
AT-rich interaction domain 4A.
    
 0.603
ARID4B
AT-rich interaction domain 4B.
    
 0.603
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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