Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RTP4Receptor transporter protein 4. (246 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
  
 0.903
H0XBY2_OTOGA
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.902
IRF7
Interferon regulatory factor 7.
   
  
 0.880
IFIT5
Interferon induced protein with tetratricopeptide repeats 5.
   
  
 0.879
IFIT1
Interferon induced protein with tetratricopeptide repeats 1.
   
  
 0.879
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.877
H0XER2_OTOGA
Uncharacterized protein.
   
  
 0.845
H0XQ95_OTOGA
Uncharacterized protein.
   
  
 0.845
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.816
IFI35
Interferon induced protein 35.
   
  
 0.804
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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