Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA16Spermatogenesis associated 16. (569 aa)    
Predicted Functional Partners:
RDH11
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
    0.994
RNF17
Ring finger protein 17.
      
 0.863
C7orf61
Chromosome 7 open reading frame 61.
      
 0.830
LOC100950708
Uncharacterized protein.
      
 0.829
H0XKK5_OTOGA
Uncharacterized protein.
      
 0.812
SPATA9
Spermatogenesis associated 9.
      
 0.749
SPEM1
Spermatid maturation 1.
      
 0.720
DPY19L2
Dpy-19 like 2.
   
  
 0.666
SPATA46
Spermatogenesis associated 46.
   
  
 0.659
ZMAT5
Zinc finger matrin-type 5.
      
 0.656
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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