Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H0WII9_OTOGAAlbA_2 domain-containing protein. (498 aa)    
Predicted Functional Partners:
PDE3A
Phosphodiesterase.
    
 
 0.862
PDE3B
Phosphodiesterase.
    
 
 0.813
ZNF667
Zinc finger protein 667.
      
 0.778
CTSF
Cathepsin F; Belongs to the peptidase C1 family.
      
 0.667
HADHB
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
   0.661
H0XQA8_OTOGA
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
   0.661
H0WS29_OTOGA
3HCDH_N domain-containing protein; Belongs to the enoyl-CoA hydratase/isomerase family.
    
   0.636
TP53BP1
Tumor protein p53 binding protein 1.
    
   0.628
STARD8
StAR related lipid transfer domain containing 8.
      
 0.529
CXCL6
C-X-C motif chemokine.
      
 0.475
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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