Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC154Coiled-coil domain containing 154. (666 aa)    
Predicted Functional Partners:
NBR1
NBR1 autophagy cargo receptor.
    
 0.733
WDFY4
WDFY family member 4.
    
  0.714
NME8
NME/NM23 family member 8.
   
   0.661
WDR90
WD repeat domain 90.
   
  0.641
TRAF7
TNF receptor associated factor 7.
    
  0.593
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.552
MDH2
Malate dehydrogenase.
    
 0.540
TONSL
Tonsoku like, DNA repair protein.
    
 0.533
PIDD1
P53-induced death domain protein 1.
    
  0.519
CKAP5
Cytoskeleton associated protein 5.
    
 0.514
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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