Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KDELR3ER lumen protein-retaining receptor. (214 aa)    
Predicted Functional Partners:
KDELR1
ER lumen protein-retaining receptor.
   
  0.978
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.918
COPB1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.881
TRIP12
Thyroid hormone receptor interactor 12.
    
   0.845
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
    
 0.831
TMED2
Transmembrane p24 trafficking protein 2.
   
 0.805
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.805
RER1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
   
 
 0.764
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
 
 0.725
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.725
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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