ABCC2 protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ABCC2

ATP binding cassette subfamily C member 2. (1546 aa)

Predicted Functional Partners:

ABCG2

0.982

PDZK1

0.878

SLC9A3R1

0.874

NUP210L

0.852

GOLPH3L

0.846

KTN1

0.811

SLC9A3R2

0.800

SUOX

0.718

LHFPL3

0.668

SLCO3A1

0.664

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCC2	ABCG2	ENSOGAP00000001412	ENSOGAP00000015426	ATP binding cassette subfamily C member 2.	ABC transporter domain-containing protein.	0.982
ABCC2	GOLPH3L	ENSOGAP00000001412	ENSOGAP00000016035	ATP binding cassette subfamily C member 2.	Golgi phosphoprotein 3 like.	0.846
ABCC2	KTN1	ENSOGAP00000001412	ENSOGAP00000013471	ATP binding cassette subfamily C member 2.	Kinectin 1.	0.811
ABCC2	LHFPL3	ENSOGAP00000001412	ENSOGAP00000021466	ATP binding cassette subfamily C member 2.	LHFPL tetraspan subfamily member 3.	0.668
ABCC2	NUP210L	ENSOGAP00000001412	ENSOGAP00000002756	ATP binding cassette subfamily C member 2.	Nucleoporin 210 like.	0.852
ABCC2	PDZK1	ENSOGAP00000001412	ENSOGAP00000020315	ATP binding cassette subfamily C member 2.	PDZ domain containing 1.	0.878
ABCC2	SLC9A3R1	ENSOGAP00000001412	ENSOGAP00000017704	ATP binding cassette subfamily C member 2.	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	0.874
ABCC2	SLC9A3R2	ENSOGAP00000001412	ENSOGAP00000021365	ATP binding cassette subfamily C member 2.	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	0.800
ABCC2	SLCO3A1	ENSOGAP00000001412	ENSOGAP00000006836	ATP binding cassette subfamily C member 2.	Solute carrier organic anion transporter family member.	0.664
ABCC2	SUOX	ENSOGAP00000001412	ENSOGAP00000006314	ATP binding cassette subfamily C member 2.	Sulfite oxidase.	0.718
ABCG2	ABCC2	ENSOGAP00000015426	ENSOGAP00000001412	ABC transporter domain-containing protein.	ATP binding cassette subfamily C member 2.	0.982
GOLPH3L	ABCC2	ENSOGAP00000016035	ENSOGAP00000001412	Golgi phosphoprotein 3 like.	ATP binding cassette subfamily C member 2.	0.846
GOLPH3L	NUP210L	ENSOGAP00000016035	ENSOGAP00000002756	Golgi phosphoprotein 3 like.	Nucleoporin 210 like.	0.887
KTN1	ABCC2	ENSOGAP00000013471	ENSOGAP00000001412	Kinectin 1.	ATP binding cassette subfamily C member 2.	0.811
LHFPL3	ABCC2	ENSOGAP00000021466	ENSOGAP00000001412	LHFPL tetraspan subfamily member 3.	ATP binding cassette subfamily C member 2.	0.668
NUP210L	ABCC2	ENSOGAP00000002756	ENSOGAP00000001412	Nucleoporin 210 like.	ATP binding cassette subfamily C member 2.	0.852
NUP210L	GOLPH3L	ENSOGAP00000002756	ENSOGAP00000016035	Nucleoporin 210 like.	Golgi phosphoprotein 3 like.	0.887
PDZK1	ABCC2	ENSOGAP00000020315	ENSOGAP00000001412	PDZ domain containing 1.	ATP binding cassette subfamily C member 2.	0.878
PDZK1	SLC9A3R1	ENSOGAP00000020315	ENSOGAP00000017704	PDZ domain containing 1.	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	0.919
PDZK1	SLC9A3R2	ENSOGAP00000020315	ENSOGAP00000021365	PDZ domain containing 1.	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	0.765