Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La ribonucleoprotein domain family member 7. (584 aa)    
Predicted Functional Partners:
MEPCE
Methylphosphate capping enzyme.
   
 0.997
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.990
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.990
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.982
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 
 0.969
ZC3H8
Zinc finger CCCH-type containing 8.
   
 
 0.960
HEXIM1
HEXIM P-TEFb complex subunit 1.
    
 0.960
HNRNPR
Uncharacterized protein.
   
 0.954
H0XUF6_OTOGA
Uncharacterized protein.
   
 0.954
H0WG26_OTOGA
SF3b1 domain-containing protein.
   
 0.952
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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