Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPSF3Cleavage and polyadenylation specific factor 3. (681 aa)    
Predicted Functional Partners:
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.999
H0WYU1_OTOGA
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.999
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 0.999
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.999
SYMPK
Symplekin.
   
 0.999
WDR33
WD repeat domain 33.
   
 0.999
H0XIU2_OTOGA
Cleavage and polyadenylation specificity factor subunit 2.
   
0.999
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.996
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.995
CSTF3
Cleavage stimulation factor subunit 3.
  
 0.994
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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