Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SARNPSAP domain containing ribonucleoprotein. (167 aa)    
Predicted Functional Partners:
ZC3H11A
Uncharacterized protein.
    
 0.992
THOC7
THO complex 7.
   
 0.992
THOC1
THO complex 1.
    
 0.991
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.991
CHTOP
Chromatin target of PRMT1.
   
 0.983
THOC2
THO complex 2.
   
 0.982
H0XSR3_OTOGA
Uncharacterized protein.
   
 0.981
H0XW89_OTOGA
Uncharacterized protein.
   
 0.981
DDX39A
Uncharacterized protein.
   
 0.976
H0XKC6_OTOGA
Uncharacterized protein.
   
 0.976
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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