H0WJ78_OTOGA protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

H0WJ78_OTOGA

Uncharacterized protein. (245 aa)

Predicted Functional Partners:

ACADSB

0.674

ORAI1

0.666

GHITM

0.649

MTMR9

0.623

BANP

0.623

IMPA1-2

0.589

IMPA1

0.589

MRE11

0.576

LCA5L

0.574

SHOX2

0.571

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACADSB	H0WJ78_OTOGA	ENSOGAP00000007816	ENSOGAP00000001534	Acyl-CoA dehydrogenase short/branched chain.	Uncharacterized protein.	0.674
ACADSB	IMPA1	ENSOGAP00000007816	ENSOGAP00000021951	Acyl-CoA dehydrogenase short/branched chain.	Inositol-1-monophosphatase.	0.568
ACADSB	IMPA1-2	ENSOGAP00000007816	ENSOGAP00000017496	Acyl-CoA dehydrogenase short/branched chain.	Inositol-1-monophosphatase.	0.568
BANP	GHITM	ENSOGAP00000019139	ENSOGAP00000010846	BTG3 associated nuclear protein.	Growth hormone inducible transmembrane protein; Belongs to the BI1 family.	0.676
BANP	H0WJ78_OTOGA	ENSOGAP00000019139	ENSOGAP00000001534	BTG3 associated nuclear protein.	Uncharacterized protein.	0.623
BANP	MRE11	ENSOGAP00000019139	ENSOGAP00000010874	BTG3 associated nuclear protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.641
BANP	ORAI1	ENSOGAP00000019139	ENSOGAP00000006549	BTG3 associated nuclear protein.	ORAI calcium release-activated calcium modulator 1.	0.676
BANP	SHOX2	ENSOGAP00000019139	ENSOGAP00000007420	BTG3 associated nuclear protein.	Short stature homeobox 2.	0.585
GHITM	BANP	ENSOGAP00000010846	ENSOGAP00000019139	Growth hormone inducible transmembrane protein; Belongs to the BI1 family.	BTG3 associated nuclear protein.	0.676
GHITM	H0WJ78_OTOGA	ENSOGAP00000010846	ENSOGAP00000001534	Growth hormone inducible transmembrane protein; Belongs to the BI1 family.	Uncharacterized protein.	0.649
GHITM	MRE11	ENSOGAP00000010846	ENSOGAP00000010874	Growth hormone inducible transmembrane protein; Belongs to the BI1 family.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.652
GHITM	ORAI1	ENSOGAP00000010846	ENSOGAP00000006549	Growth hormone inducible transmembrane protein; Belongs to the BI1 family.	ORAI calcium release-activated calcium modulator 1.	0.699
GHITM	SHOX2	ENSOGAP00000010846	ENSOGAP00000007420	Growth hormone inducible transmembrane protein; Belongs to the BI1 family.	Short stature homeobox 2.	0.712
H0WJ78_OTOGA	ACADSB	ENSOGAP00000001534	ENSOGAP00000007816	Uncharacterized protein.	Acyl-CoA dehydrogenase short/branched chain.	0.674
H0WJ78_OTOGA	BANP	ENSOGAP00000001534	ENSOGAP00000019139	Uncharacterized protein.	BTG3 associated nuclear protein.	0.623
H0WJ78_OTOGA	GHITM	ENSOGAP00000001534	ENSOGAP00000010846	Uncharacterized protein.	Growth hormone inducible transmembrane protein; Belongs to the BI1 family.	0.649
H0WJ78_OTOGA	IMPA1	ENSOGAP00000001534	ENSOGAP00000021951	Uncharacterized protein.	Inositol-1-monophosphatase.	0.589
H0WJ78_OTOGA	IMPA1-2	ENSOGAP00000001534	ENSOGAP00000017496	Uncharacterized protein.	Inositol-1-monophosphatase.	0.589
H0WJ78_OTOGA	LCA5L	ENSOGAP00000001534	ENSOGAP00000001531	Uncharacterized protein.	Lebercilin LCA5 like.	0.574
H0WJ78_OTOGA	MRE11	ENSOGAP00000001534	ENSOGAP00000010874	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.576