Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYVE1Lymphatic vessel endothelial hyaluronan receptor 1. (323 aa)    
Predicted Functional Partners:
VEGFC
Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.928
PRKG1
Protein kinase cGMP-dependent 1; Belongs to the protein kinase superfamily.
   
 0.926
PRKG2
cGMP-dependent protein kinase.
   
 0.926
STAB2
Stabilin 2.
   
 
 0.923
CCL21
C-C motif chemokine ligand 21.
   
  
 0.879
CX3CR1
C-X3-C motif chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.857
FOXC2
Forkhead box C2.
    
 0.856
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
     
 0.831
CD68
CD68 molecule.
      
 0.805
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.803
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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