Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX13Sorting nexin 13. (959 aa)    
Predicted Functional Partners:
SNX14
Sorting nexin 14.
   
 
 0.904
TSPAN2
Tetraspanin.
    
   0.888
TSPAN13
Tetraspanin 13; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.794
ANKMY2
Ankyrin repeat and MYND domain containing 2.
      
 0.674
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.629
ANKRD46
Ankyrin repeat domain 46.
     
 0.597
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
      
 0.581
GREB1L
GREB1 like retinoic acid receptor coactivator.
      
 0.580
ATP13A1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.574
SNX3
Sorting nexin 3.
     
 0.573
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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