STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE1Signal peptide, CUB domain and EGF like domain containing 1. (1019 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.738
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.712
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.712
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.681
MMP9
Matrix metallopeptidase 9.
   
 0.668
WDR90
WD repeat domain 90.
    
 0.657
ROBO3
Roundabout guidance receptor 3.
    
 0.644
ELSPBP1
Epididymal sperm binding protein 1.
   
 0.632
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.631
BUB3
BUB3 mitotic checkpoint protein.
    
 0.620
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.