Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD6Neurogenic differentiation factor. (337 aa)    
Predicted Functional Partners:
NEUROD2
Neurogenic differentiation factor.
   
    0.764
TBR1
T-box brain transcription factor 1.
   
 
 0.724
PAX6
Paired box 6.
   
 0.686
TCF3
Transcription factor 3.
    
 
 0.679
TCF4
Transcription factor 4.
    
 
 0.679
TCF12
Transcription factor 12.
    
 
 0.679
CTDSPL
CTD small phosphatase like.
      
 0.672
EP300
E1A binding protein p300.
    
   0.622
INSM1
INSM transcriptional repressor 1.
   
 0.612
INSM2
INSM transcriptional repressor 2.
   
 0.612
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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