Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM47Tripartite motif containing 47. (636 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
 0.966
H0XMK6_OTOGA
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.868
IFIH1
Interferon induced with helicase C domain 1.
   
 0.826
NUDCD1
NudC domain containing 1.
    
   0.803
MAVS
Mitochondrial antiviral signaling protein.
    
 0.798
TRIM25
Tripartite motif containing 25.
     
 0.796
SH3GLB1
SH3 domain containing GRB2 like, endophilin B1.
    
   0.796
ZC3HAV1
Zinc finger CCCH-type containing, antiviral 1.
   
 0.795
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.784
G3BP2
G3BP stress granule assembly factor 2.
    
 
 0.775
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.