Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H0WJR3_OTOGAV-SNARE coiled-coil homology domain-containing protein. (115 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.999
VAMP1
Vesicle associated membrane protein 1.
   
  0.999
STX4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.998
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
   
 0.998
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.997
STX1B
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.996
SYP
Synaptophysin.
   
 0.988
SYT1
Synaptotagmin 1.
   
 0.988
NAPA
NSF attachment protein alpha.
    
 0.987
SYT2
Synaptotagmin 2.
   
 0.983
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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