H0WJW0_OTOGA protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

H0WJW0_OTOGA

Uncharacterized protein. (552 aa)

Predicted Functional Partners:

PTPN6

0.892

PTPN11

0.850

PTPRC

0.805

H0XGQ5_OTOGA

0.628

LOC100944714

0.628

LOC100944392

0.628

OMG

0.626

H0XBH8_OTOGA

0.585

TYROBP

0.565

SYK

0.542

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H0WJW0_OTOGA	H0XBH8_OTOGA	ENSOGAP00000001808	ENSOGAP00000013060	Uncharacterized protein.	Uncharacterized protein.	0.585
H0WJW0_OTOGA	H0XGQ5_OTOGA	ENSOGAP00000001808	ENSOGAP00000015270	Uncharacterized protein.	Uncharacterized protein.	0.628
H0WJW0_OTOGA	LOC100944392	ENSOGAP00000001808	ENSOGAP00000021161	Uncharacterized protein.	Uncharacterized protein.	0.628
H0WJW0_OTOGA	LOC100944714	ENSOGAP00000001808	ENSOGAP00000019363	Uncharacterized protein.	Uncharacterized protein.	0.628
H0WJW0_OTOGA	OMG	ENSOGAP00000001808	ENSOGAP00000016881	Uncharacterized protein.	Oligodendrocyte myelin glycoprotein.	0.626
H0WJW0_OTOGA	PTPN11	ENSOGAP00000001808	ENSOGAP00000000311	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.850
H0WJW0_OTOGA	PTPN6	ENSOGAP00000001808	ENSOGAP00000009771	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.892
H0WJW0_OTOGA	PTPRC	ENSOGAP00000001808	ENSOGAP00000014622	Uncharacterized protein.	Protein tyrosine phosphatase receptor type C.	0.805
H0WJW0_OTOGA	SYK	ENSOGAP00000001808	ENSOGAP00000010510	Uncharacterized protein.	Tyrosine-protein kinase.	0.542
H0WJW0_OTOGA	TYROBP	ENSOGAP00000001808	ENSOGAP00000003748	Uncharacterized protein.	TYRO protein tyrosine kinase binding protein.	0.565
H0XBH8_OTOGA	H0WJW0_OTOGA	ENSOGAP00000013060	ENSOGAP00000001808	Uncharacterized protein.	Uncharacterized protein.	0.585
H0XBH8_OTOGA	H0XGQ5_OTOGA	ENSOGAP00000013060	ENSOGAP00000015270	Uncharacterized protein.	Uncharacterized protein.	0.707
H0XBH8_OTOGA	LOC100944392	ENSOGAP00000013060	ENSOGAP00000021161	Uncharacterized protein.	Uncharacterized protein.	0.707
H0XBH8_OTOGA	LOC100944714	ENSOGAP00000013060	ENSOGAP00000019363	Uncharacterized protein.	Uncharacterized protein.	0.707
H0XBH8_OTOGA	PTPN11	ENSOGAP00000013060	ENSOGAP00000000311	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.772
H0XBH8_OTOGA	PTPN6	ENSOGAP00000013060	ENSOGAP00000009771	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.805
H0XGQ5_OTOGA	H0WJW0_OTOGA	ENSOGAP00000015270	ENSOGAP00000001808	Uncharacterized protein.	Uncharacterized protein.	0.628
H0XGQ5_OTOGA	H0XBH8_OTOGA	ENSOGAP00000015270	ENSOGAP00000013060	Uncharacterized protein.	Uncharacterized protein.	0.707
H0XGQ5_OTOGA	PTPN11	ENSOGAP00000015270	ENSOGAP00000000311	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.985
H0XGQ5_OTOGA	PTPN6	ENSOGAP00000015270	ENSOGAP00000009771	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.969