Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H0WK18_OTOGAUncharacterized protein. (480 aa)    
Predicted Functional Partners:
GSDMB
Gasdermin B.
      
 0.878
PJVK
Pejvakin.
      
 0.683
GSDME
Gasdermin E.
      
 0.637
SRRT
Serrate, RNA effector molecule.
      
 0.569
AIM2
Absent in melanoma 2.
  
   
 0.550
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.543
RNF186
Ring finger protein 186.
      
 0.515
CASP8
Caspase 8; Belongs to the peptidase C14A family.
      
 0.468
XKR9
XK-related protein.
      
 0.459
H0WTA0_OTOGA
Uncharacterized protein.
      
 0.443
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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