Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
USP54Ubiquitin specific peptidase 54. (1380 aa)    
Predicted Functional Partners:
H0XI83_OTOGA
Ubiquitin-like domain-containing protein.
    
  0.791
H0XUE4_OTOGA
Ubiquitin-like domain-containing protein.
    
  0.791
H0XX44_OTOGA
Ubiquitin-like domain-containing protein.
    
  0.791
VRK3
VRK serine/threonine kinase 3.
    
   0.769
ZEB1
Zinc finger E-box binding homeobox 1.
    
   0.767
MYOZ1
Myozenin 1.
   
 
  0.740
PSMB1
Proteasome subunit beta.
    
   0.738
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 
 0.716
C1orf74
Chromosome 1 open reading frame 74.
      
 0.684
OTUD1
OTU deubiquitinase 1.
      
 0.641
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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