Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H0WK93_OTOGAUncharacterized protein. (565 aa)    
Predicted Functional Partners:
LOC100967169
NTF2 domain-containing protein.
    
 0.968
SRSF1
Uncharacterized protein.
   
 0.942
NXT1
Nuclear transport factor 2 like export factor 1.
    
 0.930
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.928
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.927
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.927
SRSF7
Serine and arginine rich splicing factor 7.
    
 0.907
H0XNJ3_OTOGA
RRM domain-containing protein.
    
 0.907
RAE1
Ribonucleic acid export 1.
    
 0.902
NUP98
Nucleoporin 98.
    
 0.897
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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