STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPOLGPoly(A) polymerase gamma. (408 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.969
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 0.969
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.968
CPSF4
Cleavage and polyadenylation specific factor 4.
    
 0.968
SYMPK
Symplekin.
    
 0.968
WDR33
WD repeat domain 33.
   
 0.967
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.953
H0WYU1_OTOGA
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.927
H0XIU2_OTOGA
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.927
WDR77
WD repeat domain 77.
    
 0.923
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.