Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BSNDBarttin CLCNK type accessory beta subunit. (323 aa)    
Predicted Functional Partners:
LOC100942563
Chloride channel protein.
   
 
 0.981
PCSK1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
      
 0.887
H0WU90_OTOGA
P/Homo B domain-containing protein.
      
 0.886
LDLR
Low density lipoprotein receptor.
      
 0.857
SLC12A1
Solute carrier family 12 member 1.
   
  
 0.804
USP24
Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family.
      
 0.785
CLCN1
Chloride channel protein.
   
 
 0.783
CLCN2
Chloride channel protein.
   
 
 0.763
SLC12A3
Solute carrier family 12 member 3.
   
  
 0.716
CLCN5
Chloride channel protein.
     
 0.700
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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