Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMB2Laminin subunit beta 2. (1797 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma 1.
   
 0.912
LAMC2
Laminin subunit gamma 2.
   
 0.912
LAMC3
Laminin subunit gamma 3.
   
 0.912
DAG1
Dystroglycan 1.
    
 0.827
NBR1
NBR1 autophagy cargo receptor.
    
 0.820
LAMA5
Laminin subunit alpha 5.
   
0.803
LAMA3
Laminin subunit alpha 3.
   
0.803
CD44
CD44 molecule (Indian blood group).
     
 0.803
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.795
NME8
NME/NM23 family member 8.
    
   0.771
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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