STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (355 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
0.935
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.924
H0XJY8_OTOGA
Uncharacterized protein.
  
0.906
H0XLZ3_OTOGA
Uncharacterized protein.
  
0.905
H0XI54_OTOGA
Uncharacterized protein.
  
0.904
H0Y1K1_OTOGA
Uncharacterized protein.
  
0.903
PAIP1
Poly(A) binding protein interacting protein 1.
   
 0.901
H0XUH9_OTOGA
RRM domain-containing protein.
  
0.901
TNPO1
Transportin 1.
    
 
 0.900
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.896
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.