STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (793 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.779
TMEM215
Transmembrane protein 215.
   
    0.758
JUP
Junction plakoglobin.
    
 0.753
CTNND1
Catenin delta 1.
   
 0.750
ARVCF
ARVCF delta catenin family member.
   
 0.739
CTNND2
Catenin delta 2.
   
 0.719
CTNNA3
Catenin alpha 3.
    
 0.708
PKP4
Plakophilin 4.
   
 0.706
CTNNA1
Catenin alpha 1.
    
 0.706
H0XPE0_OTOGA
Uncharacterized protein.
   
 0.706
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.