Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1LRPGRIP1 like. (1103 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
    
 0.999
NPHP1
Nephrocystin 1.
    
 0.998
H0WZ64_OTOGA
Uncharacterized protein.
    
 
 0.969
PCNT
Pericentrin.
    
 0.933
NEK4
NIMA related kinase 4.
    
 
 0.903
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.882
TMC1
Transmembrane channel-like protein.
     
 0.865
NEK11
NIMA related kinase 11.
    
 
 0.861
WHRN
Whirlin.
      
 0.860
TMEM67
Transmembrane protein 67.
   
  
 0.859
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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