STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX27Sorting nexin family member 27 (Predicted). (913 aa)    
Predicted Functional Partners:
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 
 0.949
VPS26A
VPS26, retromer complex component A.
   
 
 0.874
VPS26B
VPS26, retromer complex component B.
   
 
 0.874
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.794
OTULINL
OTU deubiquitinase with linear linkage specificity like.
    
 
 0.676
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
    
   0.653
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2.
    
   0.653
TBC1D5
TBC1 domain family member 5.
    
 
 0.641
H0X3I7_OTOGA
Uncharacterized protein.
    
 
 0.635
FRMD8
FERM domain containing 8.
    
 
 0.635
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.