STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF4Transcription factor 4. (506 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.996
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.958
TCF12
Transcription factor 12.
  
 
0.939
MYOD1
Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.
    
 0.938
JUP
Junction plakoglobin.
    
 0.919
CREBBP
CREB binding protein.
    
 0.918
LDB1
LIM domain binding 1.
    
 0.916
MYOG
Myogenin.
   
 0.904
LMO2
LIM domain only 2.
    
 0.902
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
 0.887
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.