SLBP protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	LSM10	ENSOGAP00000011107	ENSOGAP00000002374	Aly/REF export factor.	LSM10, U7 small nuclear RNA associated.	0.689
ALYREF	LSM11	ENSOGAP00000011107	ENSOGAP00000008124	Aly/REF export factor.	LSM11, U7 small nuclear RNA associated.	0.639
ALYREF	NCBP1	ENSOGAP00000011107	ENSOGAP00000012442	Aly/REF export factor.	Nuclear cap binding protein subunit 1.	0.992
ALYREF	NCBP2	ENSOGAP00000011107	ENSOGAP00000004475	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.977
ALYREF	SLBP	ENSOGAP00000011107	ENSOGAP00000008719	Aly/REF export factor.	Stem-loop binding protein.	0.949
ALYREF	UPF1	ENSOGAP00000011107	ENSOGAP00000011534	Aly/REF export factor.	UPF1 RNA helicase and ATPase.	0.978
ERI1	SLBP	ENSOGAP00000020295	ENSOGAP00000008719	Exoribonuclease 1.	Stem-loop binding protein.	0.968
LSM10	ALYREF	ENSOGAP00000002374	ENSOGAP00000011107	LSM10, U7 small nuclear RNA associated.	Aly/REF export factor.	0.689
LSM10	LSM11	ENSOGAP00000002374	ENSOGAP00000008124	LSM10, U7 small nuclear RNA associated.	LSM11, U7 small nuclear RNA associated.	0.999
LSM10	NCBP1	ENSOGAP00000002374	ENSOGAP00000012442	LSM10, U7 small nuclear RNA associated.	Nuclear cap binding protein subunit 1.	0.943
LSM10	NCBP2	ENSOGAP00000002374	ENSOGAP00000004475	LSM10, U7 small nuclear RNA associated.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.962
LSM10	SLBP	ENSOGAP00000002374	ENSOGAP00000008719	LSM10, U7 small nuclear RNA associated.	Stem-loop binding protein.	0.857
LSM11	ALYREF	ENSOGAP00000008124	ENSOGAP00000011107	LSM11, U7 small nuclear RNA associated.	Aly/REF export factor.	0.639
LSM11	LSM10	ENSOGAP00000008124	ENSOGAP00000002374	LSM11, U7 small nuclear RNA associated.	LSM10, U7 small nuclear RNA associated.	0.999
LSM11	NCBP1	ENSOGAP00000008124	ENSOGAP00000012442	LSM11, U7 small nuclear RNA associated.	Nuclear cap binding protein subunit 1.	0.692
LSM11	NCBP2	ENSOGAP00000008124	ENSOGAP00000004475	LSM11, U7 small nuclear RNA associated.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.648
LSM11	SLBP	ENSOGAP00000008124	ENSOGAP00000008719	LSM11, U7 small nuclear RNA associated.	Stem-loop binding protein.	0.894
MCM7	NCBP1	ENSOGAP00000015080	ENSOGAP00000012442	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	Nuclear cap binding protein subunit 1.	0.446
MCM7	PCNA	ENSOGAP00000015080	ENSOGAP00000017004	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.997
MCM7	SLBP	ENSOGAP00000015080	ENSOGAP00000008719	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	Stem-loop binding protein.	0.858