CHD4 protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHD3	CHD4	ENSOGAP00000002873	ENSOGAP00000008965	Chromodomain helicase DNA binding protein 3.	Uncharacterized protein.	0.999
CHD3	CHD5	ENSOGAP00000002873	ENSOGAP00000005103	Chromodomain helicase DNA binding protein 3.	Chromodomain helicase DNA binding protein 5.	0.997
CHD3	GATAD2A	ENSOGAP00000002873	ENSOGAP00000006660	Chromodomain helicase DNA binding protein 3.	GATA zinc finger domain containing 2A.	0.995
CHD3	GATAD2B	ENSOGAP00000002873	ENSOGAP00000004110	Chromodomain helicase DNA binding protein 3.	GATA zinc finger domain containing 2B.	0.995
CHD3	HDAC1	ENSOGAP00000002873	ENSOGAP00000005101	Chromodomain helicase DNA binding protein 3.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.997
CHD3	HDAC2	ENSOGAP00000002873	ENSOGAP00000009863	Chromodomain helicase DNA binding protein 3.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.996
CHD3	MTA1	ENSOGAP00000002873	ENSOGAP00000011944	Chromodomain helicase DNA binding protein 3.	Metastasis associated 1.	0.994
CHD3	MTA2	ENSOGAP00000002873	ENSOGAP00000000743	Chromodomain helicase DNA binding protein 3.	Metastasis associated 1 family member 2.	0.993
CHD3	MTA3	ENSOGAP00000002873	ENSOGAP00000004800	Chromodomain helicase DNA binding protein 3.	Metastasis associated 1 family member 3.	0.989
CHD3	SMARCA4	ENSOGAP00000002873	ENSOGAP00000017699	Chromodomain helicase DNA binding protein 3.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.748
CHD4	CHD3	ENSOGAP00000008965	ENSOGAP00000002873	Uncharacterized protein.	Chromodomain helicase DNA binding protein 3.	0.999
CHD4	CHD5	ENSOGAP00000008965	ENSOGAP00000005103	Uncharacterized protein.	Chromodomain helicase DNA binding protein 5.	0.997
CHD4	GATAD2A	ENSOGAP00000008965	ENSOGAP00000006660	Uncharacterized protein.	GATA zinc finger domain containing 2A.	0.996
CHD4	GATAD2B	ENSOGAP00000008965	ENSOGAP00000004110	Uncharacterized protein.	GATA zinc finger domain containing 2B.	0.995
CHD4	HDAC1	ENSOGAP00000008965	ENSOGAP00000005101	Uncharacterized protein.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.998
CHD4	HDAC2	ENSOGAP00000008965	ENSOGAP00000009863	Uncharacterized protein.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.998
CHD4	MTA1	ENSOGAP00000008965	ENSOGAP00000011944	Uncharacterized protein.	Metastasis associated 1.	0.996
CHD4	MTA2	ENSOGAP00000008965	ENSOGAP00000000743	Uncharacterized protein.	Metastasis associated 1 family member 2.	0.997
CHD4	MTA3	ENSOGAP00000008965	ENSOGAP00000004800	Uncharacterized protein.	Metastasis associated 1 family member 3.	0.993
CHD4	SMARCA4	ENSOGAP00000008965	ENSOGAP00000017699	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.989