MIF4GD protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTIF	DDX25	ENSOGAP00000012473	ENSOGAP00000012015	Cap binding complex dependent translation initiation factor.	DEAD-box helicase 25.	0.760
CTIF	H0X5I1_OTOGA	ENSOGAP00000012473	ENSOGAP00000010544	Cap binding complex dependent translation initiation factor.	Uncharacterized protein.	0.864
CTIF	H0XK16_OTOGA	ENSOGAP00000012473	ENSOGAP00000016456	Cap binding complex dependent translation initiation factor.	Uncharacterized protein.	0.864
CTIF	MIF4GD	ENSOGAP00000012473	ENSOGAP00000010713	Cap binding complex dependent translation initiation factor.	MIF4G domain containing.	0.961
CTIF	SLBP	ENSOGAP00000012473	ENSOGAP00000008719	Cap binding complex dependent translation initiation factor.	Stem-loop binding protein.	0.852
DDX25	CTIF	ENSOGAP00000012015	ENSOGAP00000012473	DEAD-box helicase 25.	Cap binding complex dependent translation initiation factor.	0.760
DDX25	H0X5I1_OTOGA	ENSOGAP00000012015	ENSOGAP00000010544	DEAD-box helicase 25.	Uncharacterized protein.	0.836
DDX25	H0XK16_OTOGA	ENSOGAP00000012015	ENSOGAP00000016456	DEAD-box helicase 25.	Uncharacterized protein.	0.836
DDX25	MIF4GD	ENSOGAP00000012015	ENSOGAP00000010713	DEAD-box helicase 25.	MIF4G domain containing.	0.760
EIF3G	MIF4GD	ENSOGAP00000012961	ENSOGAP00000010713	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	MIF4G domain containing.	0.670
EIF3G-2	MIF4GD	ENSOGAP00000021089	ENSOGAP00000010713	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	MIF4G domain containing.	0.670
EIF3G-3	MIF4GD	ENSOGAP00000021100	ENSOGAP00000010713	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...]	MIF4G domain containing.	0.670
H0X5I1_OTOGA	CTIF	ENSOGAP00000010544	ENSOGAP00000012473	Uncharacterized protein.	Cap binding complex dependent translation initiation factor.	0.864
H0X5I1_OTOGA	DDX25	ENSOGAP00000010544	ENSOGAP00000012015	Uncharacterized protein.	DEAD-box helicase 25.	0.836
H0X5I1_OTOGA	H0XK16_OTOGA	ENSOGAP00000010544	ENSOGAP00000016456	Uncharacterized protein.	Uncharacterized protein.	0.827
H0X5I1_OTOGA	MIF4GD	ENSOGAP00000010544	ENSOGAP00000010713	Uncharacterized protein.	MIF4G domain containing.	0.864
H0XK16_OTOGA	CTIF	ENSOGAP00000016456	ENSOGAP00000012473	Uncharacterized protein.	Cap binding complex dependent translation initiation factor.	0.864
H0XK16_OTOGA	DDX25	ENSOGAP00000016456	ENSOGAP00000012015	Uncharacterized protein.	DEAD-box helicase 25.	0.836
H0XK16_OTOGA	H0X5I1_OTOGA	ENSOGAP00000016456	ENSOGAP00000010544	Uncharacterized protein.	Uncharacterized protein.	0.827
H0XK16_OTOGA	MIF4GD	ENSOGAP00000016456	ENSOGAP00000010713	Uncharacterized protein.	MIF4G domain containing.	0.864