STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX25DEAD-box helicase 25. (483 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
    
 
 0.923
NUP214
Nucleoporin 214.
    
 
 0.832
H0XNM9_OTOGA
Uncharacterized protein.
    
 
 0.832
MIF4GD
MIF4G domain containing.
    
   0.739
CTIF
Cap binding complex dependent translation initiation factor.
    
   0.739
XPO1
Exportin 1.
    
 
 0.730
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
  
0.677
H0X5I1_OTOGA
Uncharacterized protein.
  
 
  
0.661
H0XK16_OTOGA
Uncharacterized protein.
  
 
  
0.661
NUP88
Nucleoporin 88.
    
 
 0.654
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.