STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (804 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.962
H0XY77_OTOGA
RRM domain-containing protein.
   
 0.962
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.952
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.952
H0XKB9_OTOGA
Uncharacterized protein.
   
 0.952
H0XM82_OTOGA
Uncharacterized protein.
   
 0.952
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.938
SRSF1
Uncharacterized protein.
   
 0.932
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.919
H0XQF0_OTOGA
RRM domain-containing protein.
   
 0.919
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.