STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKHD1PKHD1 ciliary IPT domain containing fibrocystin/polyductin. (4077 aa)    
Predicted Functional Partners:
CBLC
Cbl proto-oncogene C.
    
 0.739
CBL
Cbl proto-oncogene.
    
 0.739
CBLB
Cbl proto-oncogene B.
    
 0.739
SEMA6C
Semaphorin 6C; Belongs to the semaphorin family.
    
 0.622
CEP85
Centrosomal protein 85.
    
 0.621
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
 0.616
SEMA7A
Semaphorin 7A (John Milton Hagen blood group); Belongs to the semaphorin family.
    
 0.616
SEMA4C
Semaphorin 4C; Belongs to the semaphorin family.
    
 0.616
SEMA3C
Semaphorin 3C; Belongs to the semaphorin family.
    
 0.616
SEMA3G
Semaphorin 3G; Belongs to the semaphorin family.
    
 0.616
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.