Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHX4LIM homeobox 4. (390 aa)    
Predicted Functional Partners:
ISL1
ISL LIM homeobox 1.
    
 0.986
ISL2
ISL LIM homeobox 2.
    
 0.984
LDB1
LIM domain binding 1.
    
 0.974
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.945
SSBP4
Single stranded DNA binding protein 4.
    
 
 0.932
ORC6
Origin recognition complex subunit 6.
    
   0.931
SH2D1A
SH2 domain-containing protein 1A; Cytoplasmic adapter regulating receptors of the signaling lymphocytic activation molecule (SLAM) family such as SLAMF1, CD244, LY9, CD84, SLAMF6 and SLAMF7. In SLAM signaling seems to cooperate with SH2D1B/EAT-2.
    
   0.867
LHX3
LIM homeobox 3.
   
  0.855
LDB2
LIM domain binding 2.
    
 0.844
ALX3
ALX homeobox 3.
    
 0.839
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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