STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP3Single stranded DNA binding protein 3. (278 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 
 0.808
LDB2
LIM domain binding 2.
    
 
 0.798
LHX3
LIM homeobox 3.
    
 
 0.703
LHX9
LIM homeobox 9.
    
 
 0.694
LHX4
LIM homeobox 4.
    
 
 0.692
LMO4
LIM domain only 4.
    
 
 0.664
LHX2
LIM homeobox 2.
    
 
 0.658
LMO1
LIM domain only 1.
    
 
 0.633
LMO3
LIM domain only 3.
    
 
 0.633
RNF11
Ring finger protein 11.
   
    0.613
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.