STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0XI90_OTOGARRM domain-containing protein. (494 aa)    
Predicted Functional Partners:
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
0.945
SRSF1
Uncharacterized protein.
   
 0.889
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
0.865
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.864
SFPQ
Splicing factor proline and glutamine rich.
   
 
 0.853
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.851
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.847
TRA2B
Transformer 2 beta homolog.
   
 0.822
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.812
H0XKB9_OTOGA
Uncharacterized protein.
   
 0.812
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.