STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX2-5NK2 homeobox 5. (324 aa)    
Predicted Functional Partners:
TBX5
T-box transcription factor 5.
   
 
 0.962
GATA4
GATA binding protein 4.
   
 0.955
MEF2B
Myocyte enhancer factor 2B.
    
 
 0.936
MEF2A
Myocyte enhancer factor 2A.
    
 
 0.924
GATA5
GATA binding protein 5.
   
 0.911
MEF2C
Myocyte enhancer factor 2C.
    
 
 0.907
GATA6
GATA binding protein 6.
   
 0.897
TBX4
T-box transcription factor 4.
   
 
 0.887
GATA1
GATA binding protein 1.
   
 0.864
MEF2D
Myocyte enhancer factor 2D.
    
 
 0.781
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.