GNA13 protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRA1A	ARHGEF1	ENSOGAP00000015626	ENSOGAP00000005086	Adrenoceptor alpha 1A.	Rho guanine nucleotide exchange factor 1.	0.566
ADRA1A	ARHGEF11	ENSOGAP00000015626	ENSOGAP00000001373	Adrenoceptor alpha 1A.	Rho guanine nucleotide exchange factor 11.	0.447
ADRA1A	ARHGEF12	ENSOGAP00000015626	ENSOGAP00000009436	Adrenoceptor alpha 1A.	Rho guanine nucleotide exchange factor 12.	0.701
ADRA1A	GNA12	ENSOGAP00000015626	ENSOGAP00000006148	Adrenoceptor alpha 1A.	G protein subunit alpha 12.	0.968
ADRA1A	GNA13	ENSOGAP00000015626	ENSOGAP00000019237	Adrenoceptor alpha 1A.	G protein subunit alpha 13.	0.980
ADRA1A	GNB1	ENSOGAP00000015626	ENSOGAP00000004267	Adrenoceptor alpha 1A.	G protein subunit beta 1.	0.891
ADRA1A	GNB4	ENSOGAP00000015626	ENSOGAP00000000783	Adrenoceptor alpha 1A.	G protein subunit beta 4.	0.891
ADRA1A	GNG2	ENSOGAP00000015626	ENSOGAP00000005871	Adrenoceptor alpha 1A.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.907
ADRA1A	TBXA2R	ENSOGAP00000015626	ENSOGAP00000017601	Adrenoceptor alpha 1A.	Thromboxane A2 receptor; Belongs to the G-protein coupled receptor 1 family.	0.713
ARHGEF1	ADRA1A	ENSOGAP00000005086	ENSOGAP00000015626	Rho guanine nucleotide exchange factor 1.	Adrenoceptor alpha 1A.	0.566
ARHGEF1	ARHGEF11	ENSOGAP00000005086	ENSOGAP00000001373	Rho guanine nucleotide exchange factor 1.	Rho guanine nucleotide exchange factor 11.	0.896
ARHGEF1	ARHGEF12	ENSOGAP00000005086	ENSOGAP00000009436	Rho guanine nucleotide exchange factor 1.	Rho guanine nucleotide exchange factor 12.	0.867
ARHGEF1	GNA12	ENSOGAP00000005086	ENSOGAP00000006148	Rho guanine nucleotide exchange factor 1.	G protein subunit alpha 12.	0.983
ARHGEF1	GNA13	ENSOGAP00000005086	ENSOGAP00000019237	Rho guanine nucleotide exchange factor 1.	G protein subunit alpha 13.	0.996
ARHGEF1	TBXA2R	ENSOGAP00000005086	ENSOGAP00000017601	Rho guanine nucleotide exchange factor 1.	Thromboxane A2 receptor; Belongs to the G-protein coupled receptor 1 family.	0.470
ARHGEF11	ADRA1A	ENSOGAP00000001373	ENSOGAP00000015626	Rho guanine nucleotide exchange factor 11.	Adrenoceptor alpha 1A.	0.447
ARHGEF11	ARHGEF1	ENSOGAP00000001373	ENSOGAP00000005086	Rho guanine nucleotide exchange factor 11.	Rho guanine nucleotide exchange factor 1.	0.896
ARHGEF11	ARHGEF12	ENSOGAP00000001373	ENSOGAP00000009436	Rho guanine nucleotide exchange factor 11.	Rho guanine nucleotide exchange factor 12.	0.889
ARHGEF11	GNA12	ENSOGAP00000001373	ENSOGAP00000006148	Rho guanine nucleotide exchange factor 11.	G protein subunit alpha 12.	0.981
ARHGEF11	GNA13	ENSOGAP00000001373	ENSOGAP00000019237	Rho guanine nucleotide exchange factor 11.	G protein subunit alpha 13.	0.994