STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISL1ISL LIM homeobox 1. (361 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.992
LHX4
LIM homeobox 4.
    
 0.986
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.965
LHX3
LIM homeobox 3.
    
 0.954
SSBP4
Single stranded DNA binding protein 4.
    
 
 0.930
LDB2
LIM domain binding 2.
    
 0.911
GATA4
GATA binding protein 4.
    
 0.845
NKX2-5
NK2 homeobox 5.
    
 0.838
GABRP
Gamma-aminobutyric acid type A receptor pi subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.831
GATA6
GATA binding protein 6.
    
 0.829
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.