STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISL1ISL LIM homeobox 1. (361 aa)    
Predicted Functional Partners:
LHX3
LIM homeobox 3.
    
0.957
LHX4
LIM homeobox 4.
    
0.934
LDB1
LIM domain binding 1.
    
 0.925
LDB2
LIM domain binding 2.
    
 0.917
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.805
SSBP4
Single stranded DNA binding protein 4.
    
 
 0.752
PTF1A
Pancreas associated transcription factor 1a.
   
 0.660
POU4F2
POU domain protein.
    
 
 0.596
GATA3
GATA binding protein 3.
   
 0.588
PAX6
Paired box 6.
   
 
 0.586
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.