STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD1Neurogenic differentiation factor. (356 aa)    
Predicted Functional Partners:
TCF12
Transcription factor 12.
    
 
 0.832
TCF3
Transcription factor 3.
    
 
 0.741
TCF4
Transcription factor 4.
    
 
 0.732
INSM1
INSM transcriptional repressor 1.
   
 0.533
INSM2
INSM transcriptional repressor 2.
   
 0.533
PAX6
Paired box 6.
   
 
 0.531
GCK
Phosphotransferase.
     
 0.527
NKX2-2
NK2 homeobox 2.
   
 0.514
HES2
Hes family bHLH transcription factor 2.
   
 0.489
HES6
Hes family bHLH transcription factor 6.
    
 0.473
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.