Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD1Neurogenic differentiation factor. (356 aa)    
Predicted Functional Partners:
TCF3
Transcription factor 3.
    
 
 0.872
TCF12
Transcription factor 12.
    
 
 0.857
TCF4
Transcription factor 4.
    
 
 0.835
EP300
E1A binding protein p300.
    
 
 0.770
PAX6
Paired box 6.
   
 0.683
GCK
Phosphotransferase.
     
 0.644
PAX4
Paired box 4.
   
 0.598
INSM1
INSM transcriptional repressor 1.
   
 0.574
INSM2
INSM transcriptional repressor 2.
   
 0.574
NEUROG3
Neurogenin 3.
    
 0.553
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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