rpsT protein (Campylobacter lari) - STRING interaction network

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Score

rpsT

30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa)

Predicted Functional Partners:

rpsO

0.990

rplU

0.989

rplM

0.989

rpsP

0.989

rpmB

0.989

rpmF

0.989

rpmE

0.989

rpsU

0.989

rpmA

0.988

rpsI

0.988

Your Current Organism:

Campylobacter lari

NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Cla_0384	Cla_0183	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rpmA	Cla_0384	Cla_0184	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF01016.10 Ribosomal_L27; Belongs to the bacterial ribosomal protein bL27 family.	0.990
rplM	rpmB	Cla_0384	Cla_1029	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplM	rpmE	Cla_0384	Cla_1420	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L31; Binds the 23S rRNA.	0.990
rplM	rpmF	Cla_0384	Cla_1336	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF01783.14 Ribosomal_L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.988
rplM	rpsI	Cla_0384	Cla_0385	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF00380.10 Ribosomal_S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rplM	rpsO	Cla_0384	Cla_0943	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.992
rplM	rpsP	Cla_0384	Cla_0996	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF00886.10 Ribosomal_S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplM	rpsT	Cla_0384	Cla_0016	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplM	rpsU	Cla_0384	Cla_1556	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF01165.11 Ribosomal_S21; Belongs to the bacterial ribosomal protein bS21 family.	0.987
rplU	rplM	Cla_0183	Cla_0384	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rplU	rpmA	Cla_0183	Cla_0184	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF01016.10 Ribosomal_L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplU	rpmB	Cla_0183	Cla_1029	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplU	rpmE	Cla_0183	Cla_1420	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L31; Binds the 23S rRNA.	0.990
rplU	rpmF	Cla_0183	Cla_1336	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF01783.14 Ribosomal_L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.989
rplU	rpsI	Cla_0183	Cla_0385	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF00380.10 Ribosomal_S9; Belongs to the universal ribosomal protein uS9 family.	0.990
rplU	rpsO	Cla_0183	Cla_0943	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.987
rplU	rpsP	Cla_0183	Cla_0996	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF00886.10 Ribosomal_S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplU	rpsT	Cla_0183	Cla_0016	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplU	rpsU	Cla_0183	Cla_1556	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF01165.11 Ribosomal_S21; Belongs to the bacterial ribosomal protein bS21 family.	0.988