Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cla_0040 | znuA | Cla_0040 | Cla_0039 | Conserved hypothetical protein. | Cation ABC transporter, periplasmic cation-binding protein; Pfam match to PF01297.8 SBP_bac_9. | 0.629 |
| Cla_0040 | znuB | Cla_0040 | Cla_0037 | Conserved hypothetical protein. | Cation ABC transporter, permease protein; Pfam match to PF00950.8 ABC-3. | 0.626 |
| Cla_0040 | znuC | Cla_0040 | Cla_0038 | Conserved hypothetical protein. | Cation ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran. | 0.626 |
| rpmB | rpoB | Cla_1029 | Cla_0449 | Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
| rpmB | rpoC | Cla_1029 | Cla_0450 | Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family. | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
| rpmB | rpsN | Cla_1029 | Cla_0072 | Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.990 |
| rpmB | znuA | Cla_1029 | Cla_0039 | Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family. | Cation ABC transporter, periplasmic cation-binding protein; Pfam match to PF01297.8 SBP_bac_9. | 0.658 |
| rpoB | rpmB | Cla_0449 | Cla_1029 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.924 |
| rpoB | rpoC | Cla_0449 | Cla_0450 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpsN | Cla_0449 | Cla_0072 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.993 |
| rpoB | znuA | Cla_0449 | Cla_0039 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Cation ABC transporter, periplasmic cation-binding protein; Pfam match to PF01297.8 SBP_bac_9. | 0.437 |
| rpoC | rpmB | Cla_0450 | Cla_1029 | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.924 |
| rpoC | rpoB | Cla_0450 | Cla_0449 | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoC | rpsN | Cla_0450 | Cla_0072 | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.993 |
| rpoC | znuA | Cla_0450 | Cla_0039 | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Cation ABC transporter, periplasmic cation-binding protein; Pfam match to PF01297.8 SBP_bac_9. | 0.437 |
| rpsN | rpmB | Cla_0072 | Cla_1029 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | Pfam match to PF00830.10 Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.990 |
| rpsN | rpoB | Cla_0072 | Cla_0449 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
| rpsN | rpoC | Cla_0072 | Cla_0450 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
| rpsN | znuA | Cla_0072 | Cla_0039 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | Cation ABC transporter, periplasmic cation-binding protein; Pfam match to PF01297.8 SBP_bac_9. | 0.673 |
| znuA | Cla_0040 | Cla_0039 | Cla_0040 | Cation ABC transporter, periplasmic cation-binding protein; Pfam match to PF01297.8 SBP_bac_9. | Conserved hypothetical protein. | 0.629 |
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