STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dgkADiacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (123 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; Pfam match to PF01148.11 CTP_transf_1.
    
 0.910
plsC
Pfam match to PF01553.12 Acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.902
eptC
Conserved hypothetical protein, putative sulfatase; Pfam matches to PF08019.3 DUF1705, and to PF00884.14 Sulfatase.
 
   
 0.861
gpsA
Glycerol 3-phosphate dehydrogenase; Pfam matches to PF01210.14 NAD_Gly3P_dh_N, and to PF07479.5 NAD_Gly3P_dh_C; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.830
pyrC1
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
       0.825
Cla_0042
Conserved hypothetical protein.
       0.825
ybeY
Conserved hypothetical protein (UPF0054 domain protein); Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.718
xth
Exodeoxyribonuclease III; Pfam match to PF03372.14 Exo_endo_phos.
       0.651
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.