Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
maf2Motility accessory factor; Pfam match to PF01973.9 DUF115. (570 aa)    
Predicted Functional Partners:
flaA
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.786
flaB
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.709
pseH
N-acetyltransferase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc; Pfam match to PF00583.15 Acetyltransf_1.
 
   
 0.703
kpsM
Capsular polysaccharide ABC transporter, permease protein; Pfam match to PF01061.15 ABC2_membrane.
    
 
 0.672
Cla_0159
Na+/H+ antiporter; Pfam match to PF00999.12 Na_H_Exchanger.
 
     0.666
ptmA
Flagellin modification protein PtmA, putative oxidoreductase.
      
 0.658
kpsE
Capsular polysaccharide export inner-membrane protein KpsE.
      
 0.637
ptmB
Flagellin modification protein PtmB, acylneuraminate cytidylyltransferase; Pfam match to PF02348.10 CTP_transf_3.
     
 0.617
pseA
Pseudaminic acid biosynthesis protein PseA.
      
 0.609
fliW
Conserved hypothetical protein (DUF180 domain protein); Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
  
     0.579
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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