Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cla_0159 | bioB | Cla_0159 | Cla_0160 | Na+/H+ antiporter; Pfam match to PF00999.12 Na_H_Exchanger. | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.814 |
| Cla_0159 | flaA | Cla_0159 | Cla_0163 | Na+/H+ antiporter; Pfam match to PF00999.12 Na_H_Exchanger. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.400 |
| Cla_0159 | maf2 | Cla_0159 | Cla_0162 | Na+/H+ antiporter; Pfam match to PF00999.12 Na_H_Exchanger. | Motility accessory factor; Pfam match to PF01973.9 DUF115. | 0.667 |
| Cla_0159 | topA | Cla_0159 | Cla_0161 | Na+/H+ antiporter; Pfam match to PF00999.12 Na_H_Exchanger. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.814 |
| bioB | Cla_0159 | Cla_0160 | Cla_0159 | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Na+/H+ antiporter; Pfam match to PF00999.12 Na_H_Exchanger. | 0.814 |
| bioB | flaA | Cla_0160 | Cla_0163 | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.405 |
| bioB | maf2 | Cla_0160 | Cla_0162 | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Motility accessory factor; Pfam match to PF01973.9 DUF115. | 0.561 |
| bioB | topA | Cla_0160 | Cla_0161 | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.834 |
| flaA | Cla_0159 | Cla_0163 | Cla_0159 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Na+/H+ antiporter; Pfam match to PF00999.12 Na_H_Exchanger. | 0.400 |
| flaA | bioB | Cla_0163 | Cla_0160 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.405 |
| flaA | flaB | Cla_0163 | Cla_0164 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.950 |
| flaA | fliW | Cla_0163 | Cla_0959 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Conserved hypothetical protein (DUF180 domain protein); Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.746 |
| flaA | maf2 | Cla_0163 | Cla_0162 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Motility accessory factor; Pfam match to PF01973.9 DUF115. | 0.707 |
| flaA | maf5 | Cla_0163 | Cla_0167 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Motility accessory factor; Pfam match to PF01973.9 DUF115. | 0.505 |
| flaA | topA | Cla_0163 | Cla_0161 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.636 |
| flaB | flaA | Cla_0164 | Cla_0163 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.950 |
| flaB | fliW | Cla_0164 | Cla_0959 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Conserved hypothetical protein (DUF180 domain protein); Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.754 |
| flaB | maf2 | Cla_0164 | Cla_0162 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Motility accessory factor; Pfam match to PF01973.9 DUF115. | 0.598 |
| flaB | maf5 | Cla_0164 | Cla_0167 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Motility accessory factor; Pfam match to PF01973.9 DUF115. | 0.508 |
| flaB | topA | Cla_0164 | Cla_0161 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.575 |
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