STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maf3Motility accessory factor; Pfam match to PF01973.9 DUF115. (625 aa)    
Predicted Functional Partners:
maf
Septum formation protein Maf; Pfam match to PF02545.5 Maf; Belongs to the Maf family.
      
 0.832
pseI
N-acetylneuraminic acid synthetase; Pfam matches to PF03102.5 NeuB, and to PF08666.3 SAF.
 
    0.823
maf5
Motility accessory factor; Pfam match to PF01973.9 DUF115.
 
   
0.818
maf4
Motility accessory factor; Pfam match to PF01973.9 DUF115.
 
    
0.799
maf6
Motility accessory factor; Pfam match to PF01973.9 DUF115.
 
    
0.766
flgL
Flagellin family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.687
fliH
Flagellar biosynthesis protein FliH; Pfam match to PF02108.7 FliH.
  
     0.634
pglE
UDP-4-keto-6-deoxy-GlcNAc C4 aminotransferase; Pfam match to PF01041.8 DegT_DnrJ_EryC1; Belongs to the DegT/DnrJ/EryC1 family.
   
  
 0.633
Cla_0370
Conserved hypothetical protein.
  
     0.628
flgP
Conserved hypothetical lipoprotein (DUF400 domain protein); Pfam match to PF04164.4 DUF400.
  
     0.610
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.