Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
maf5Motility accessory factor; Pfam match to PF01973.9 DUF115. (578 aa)    
Predicted Functional Partners:
pseI
N-acetylneuraminic acid synthetase; Pfam matches to PF03102.5 NeuB, and to PF08666.3 SAF.
 
     0.855
maf4
Motility accessory factor; Pfam match to PF01973.9 DUF115.
 
    
0.838
maf3
Motility accessory factor; Pfam match to PF01973.9 DUF115.
 
   
0.802
maf6
Motility accessory factor; Pfam match to PF01973.9 DUF115.
 
   
0.766
pseH
N-acetyltransferase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc; Pfam match to PF00583.15 Acetyltransf_1.
  
   
 0.739
kpsM
Capsular polysaccharide ABC transporter, permease protein; Pfam match to PF01061.15 ABC2_membrane.
    
 
 0.672
ptmA
Flagellin modification protein PtmA, putative oxidoreductase.
     
 0.658
flaB
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.647
flaA
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.642
kpsE
Capsular polysaccharide export inner-membrane protein KpsE.
      
 0.637
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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