STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palPeptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (161 aa)    
Predicted Functional Partners:
tolB
Translocation protein TolB precursor; Pfam match to PF04052.4 TolB_N.
 
 
 0.957
bamA
Conserved hypothetical protein, putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.953
exbB1
TonB system transport protein ExbB; Pfam match to PF01618.7 MotA_ExbB.
 
   
 0.896
exbD1
TonB system transport protein ExbD; Pfam match to PF02472.7 ExbD.
 
 
 
 0.882
ybgF
Conserved hypothetical protein.
  
  
 0.831
cjaA
Amino acid ABC transporter, periplasmic solute-binding lipoprotein; Pfam match to PF00497.11 SBP_bac_3.
    
 
 0.824
slyD
FKBP-type peptidyl-prolyl cis-trans isomerase; Pfam match to PF00254.19 FKBP_C.
 
     0.799
Cla_0206
Conserved hypothetical protein, putative ATPase (PP-loop superfamily); Pfam match to PF01171.11 ATP_bind_3; Belongs to the TtcA family.
   
   0.777
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
    0.766
pfs
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
    0.764
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.