Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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palPeptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (161 aa)    
Predicted Functional Partners:
tolB
Translocation protein TolB precursor; Pfam match to PF04052.4 TolB_N.
 
 
 0.928
bamA
Conserved hypothetical protein, putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.914
exbB1
TonB system transport protein ExbB; Pfam match to PF01618.7 MotA_ExbB.
 
   
 0.904
flgE1
Flagellar hook protein FlgE; Pfam matches to PF00460.11 Flg_bb_rod, and to PF07559.5 FlaE.
   
 
 0.890
exbD1
TonB system transport protein ExbD; Pfam match to PF02472.7 ExbD.
 
 
 
 0.888
ybgF
Conserved hypothetical protein.
  
  
 0.853
slyD
FKBP-type peptidyl-prolyl cis-trans isomerase; Pfam match to PF00254.19 FKBP_C.
 
     0.815
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.794
Cla_0206
Conserved hypothetical protein, putative ATPase (PP-loop superfamily); Pfam match to PF01171.11 ATP_bind_3; Belongs to the TtcA family.
   
   0.791
pfs
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
    0.785
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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