Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
flhFFlagellar biosynthesis (GTP-binding) protein FlhF; Pfam match to PF00448.13 SRP54. (461 aa)    
Predicted Functional Partners:
flhG
Conserved hypothetical protein, ATPase, ParA family; Pfam match to PF01656.14 CbiA.
 
 
 0.999
fliM
Flagellar motor switch protein FliM; Pfam match to PF02154.6 FliM.
 
 
 0.993
fliY
Flagellar motor switch protein FliY; Pfam match to PF01052.11 SpoA.
 
 
 0.988
fliG
Flagellar motor switch protein FliG; Pfam match to PF01706.7 FliG_C.
 
 
 0.977
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.975
fliF
Flagellar MS-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.968
flgE1
Flagellar hook protein FlgE; Pfam matches to PF00460.11 Flg_bb_rod, and to PF07559.5 FlaE.
 
  
 0.963
fliE
Flagellar proximal rod protein FliE; Pfam match to PF02049.9 FliE.
 
  
 0.957
flhB
Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
  
 0.957
cheV
Chemotaxis protein CheV; Pfam matches to PF01584.10 CheW, and to PF00072.15 Response_reg.
 
 
 0.940
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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